CDS

Accession Number TCMCG057C16032
gbkey CDS
Protein Id XP_018483112.1
Location join(6144483..6145550,6145653..6145766,6145867..6145964,6146066..6146147,6146269..6146427,6146527..6146616,6146704..6146837,6146993..6147152,6147263..6147346,6147448..6147657,6147727..6147852,6147945..6148082,6148156..6148262,6148378..6148441,6148534..6148622,6148718..6148859,6148942..6149005,6149097..6149164,6149246..6149434,6149529..6149636)
Gene LOC108854103
GeneID 108854103
Organism Raphanus sativus

Protein

Length 1097aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018627610.1
Definition PREDICTED: isoleucine--tRNA ligase, cytoplasmic-like [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category J
Description Belongs to the class-I aminoacyl-tRNA synthetase family
KEGG_TC -
KEGG_Module M00359        [VIEW IN KEGG]
M00360        [VIEW IN KEGG]
KEGG_Reaction R03656        [VIEW IN KEGG]
KEGG_rclass RC00055        [VIEW IN KEGG]
RC00523        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko01007        [VIEW IN KEGG]
ko03016        [VIEW IN KEGG]
KEGG_ko ko:K01870        [VIEW IN KEGG]
EC 6.1.1.5        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00970        [VIEW IN KEGG]
map00970        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004812        [VIEW IN EMBL-EBI]
GO:0004822        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0006082        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006399        [VIEW IN EMBL-EBI]
GO:0006412        [VIEW IN EMBL-EBI]
GO:0006418        [VIEW IN EMBL-EBI]
GO:0006428        [VIEW IN EMBL-EBI]
GO:0006518        [VIEW IN EMBL-EBI]
GO:0006520        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016874        [VIEW IN EMBL-EBI]
GO:0016875        [VIEW IN EMBL-EBI]
GO:0017101        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0019752        [VIEW IN EMBL-EBI]
GO:0019899        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0043038        [VIEW IN EMBL-EBI]
GO:0043039        [VIEW IN EMBL-EBI]
GO:0043043        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043436        [VIEW IN EMBL-EBI]
GO:0043603        [VIEW IN EMBL-EBI]
GO:0043604        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044271        [VIEW IN EMBL-EBI]
GO:0044281        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0051020        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0140098        [VIEW IN EMBL-EBI]
GO:0140101        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901566        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGAAGAGGTAGGAGAAGGGAAGGAGTTCTCGTTCCCTCGCGAGGAAGAGAAAGTCCTCTCCTTCTGGACTCAGATCGATGCGTTCAAGACGCAGCTGAAACGAACGGAGCATCTCCCGGAGTTCATCTTCTACGACGGTCCTCCTTTCGCCACCGGTCTTCCTCACCCCGGTCACATCCTCGCCAGTACCATCAAGGACATCGTAACTCGCTACCAGACCATGACGGGCCACCACGTGACGCGTCGCTTCGGTTGGGACTGTCACGGCATCCCCATCGAGACCGTGATCGATAAGAAGCTCGGTATTGAGAGGAGAGCCCAAGTGCTTGAGATGGGGATTGATAAGTACAACGAAGAGTGTAGGAGTGTTGTGTCTACGTTTGTGGAGGAGTGGGAGAAGGTTATCACTAGGAGCGGGCGTTGGATTGATTTCAAGAACGACTATAAGACGATGGATATGAGTTTTATGGAGAGTGTTTGGTGGGTGTTCGCTCAGCTTTTTGATAAGAAGCTTATCTACAAAAGCTTCAAGGTTATGCCTTATAGTACTGGTCTTAAGACGCAGTTGTCGAATTCGGAGCTGAAGGAAAGCAAAAAGCTCGTTTCGGATCCTGATGCTATGGTGACGTTTCCAGTTATTGGCGATCAAGATAACGCTGCTTTTGTGGCATGGACCACTACTCCGTGGAATCTTCCTTGCAATCTCGCTTTGTGTGTCAATCCCAAGTTTGTTTATGTCAAGGTTCGTAACAAGCACAATGGGAGAGTCTACGTTGTTGCTGAATCTCTCCTCTCGTCTCTTCCCAGCTTTGCTGATACCAAGAAAGGCAAAGGTGGTGGTGGTGATGATTCTTATCAAGTGTTGGAGACGTTTGAAGGAGCTTCCCTGGTTGGGAAGAAGTACGAACCTTTGTTTGAGTACTTTAGTGAGTTCTCAAGCGTGGCCTTTCGAGTTGTGGCGGATGATTATGTCACTGATAAAAGTGGTACTGGCATCGTCCACTTGGCTCCCGCCTTTGGTGAAGACGATTACCGTGTTTGTCTTGAGAACAACATCGTTGAAGAGGGTGAGGATCTAGTCGTGGCTGTTGATGAAGATGGCTTGTTTACTGAGAGAATTACCCATTTCTTTGGCCGCTATGTCAAAGATGCAGACAAAGATATTATTGAAGCCGTGAAGGCCAAAGGCAGACTTGTTAAAACTGGGAGAGTTACTCACGAATATCCATTTTGCCCTCGATCACACACTCCTATCATATATAGGGCCCTTCCCTCTTGGTTTATGAGGGTGGATGAGCAGTTGAAGGAACAGATGTTAGAGAATACAAAACAGACCCACTGGGTACCCAATTATGTGAAGGATAAACGCTTTCACAATTGGCTTGAAAACGCAAGGGATTGGTGCATTAGCCGAAGTAGATTTTGGGGCACGCCTCTACCAATATGGATCAGTGATGATGGTGAGGAAGTTGTTGTCATGGATTCTGTCGACAAGCTTGAGAAGCTCTCCGGTGTCAAGGTCTTTGATCTACACCGGCACCATATTGATCAAATTACAATCCCATCTAGTCGTGGGCCTGAGTTTGGCGTGCTCCGTCGTGTAGAAGACGTTTTTGATTGTTGGTTTGAGAGTGGGTCAATGCCTTATGCGTACATCCATTATCCTTTTGAAAACAAGGAGCTCTTCGAGAAGAACTTCCCTGGTCATTTTGTGGCTGAAGGGCTTGATCAGACTCGTGGATGGTTCTATTCTCTTATGGTGCTGTCGACTGCACTGTTTGGAAAGCCAGCATTTCAAAATCTGATTTGCAATGGTATTGTGCTTGATAAGGATGGCAAAAAGATGAGTAAGAGTTTAAATAATTATCCGCCTACTTTGGAAATCATAAATGAGTATGGAGCTGATGCTGTGCGATTGTACCTCATCAACTCTCCGATTGTACGCGCTGAGCCACTACGCTTCAAAAAGGAAGGAGCACTTGGTGTTGTCAAAGATGTATTTCTTCCATGGTACAATGCATACAGATTTCTTGTTCAGAATGCAAAGAGGCTTGAGATTGAGGGTTCTGGACCGTTTGTTCCTACTGATGTAGCAACTTTACGGTCATCAAACGTTCTCGATCAGTGGATTCACTCAGCTACCCAGAGTCTTGTCTGTTTTGTCCGCCAGGAGATGGATGGTTATCGGCTTTATACTGTTGTTCCATATCTTTTGAAGTTCCTCGACAATCTCACTAACATATATGTAAGATTCAGCCGCAAGAGGTTGAAAGGCCGTACAGGAGAAGATGATTGTCACATTGCTCTTTCAACTCTATACAATGTGCTCCTCACTTCTTGCAAAGTGATGACCCCTTTTACACCTTTCTTCACTGAGACGTTATACCAGAATCTGCGGAAAGTACGTGAAGGTTCTGAGGAAAGCATCCATTACTGCAGATTTCCGGAAGCGGACAAAACGAGAGTGGAGAGGAGGATTGAGCAAAGTGTTGCAAGGATGATGACAGTGATTGATCTTGCTCGGAACATTCGTGAGCGTCACAAGCTACCCTTGAAAACTCCTCTAATGGAAATCACTGTAGTTCATCCGGATGCAGAATTCTTGGATGACATAACTGGAAAACTAAGAGAGTATGTCTTGGAAGAACTTAATGTAAGATCTCTTGTGATATGCAATGATACTCTGAAGTATGCGTCTCTAAAAGCAGAACCAGATTTCAGTGTATTGGGAAAACGGCTTGGGAAGTCAATGGGGCTTGTTGCAAAACAAGTTAAAGAAATGTCTCAGCAAGATATCTTAAGATTCGAGGAGGCCGGAAAAGTTACTATTGATGGACACACGCTGGAGCTAACAGATATCAAGATTGTCAGGCTTTTCAAACGTCCGGATGGTTTGAAAGATACGGAGATTGATGCAAATGGAGATGGTGATGTTTTGGTGCTTTTGGATCTACGACCAGATGATTCATTGTATGAAGCAGGTGTTGCTCGTGAGATTGTCAATAGGGTCCAAAAACTGAGGAAGAAGTCAGGTCTAGAACCAACAGACTTTGTGGAAGTGTACATTGAACCACTGGAAAAGGATGAATCTGCTTTGCAACAAGTTGTGAGCTCTCAGGAACAATACATTAAGGAAACAATTGGTTCATCTTTGCTTCCGTCTACGTTGATGCCATCTCATGCAGTGATATTATCTGAAGAGAGTTTCCAAAACGTTTCGAAGCTGTCGTTTAAGATTAGCTTGGTTCGTCCGGCTTTGAAGTTCAACAAAGATGCCATTCTTGCATTGTAG
Protein:  
MEEVGEGKEFSFPREEEKVLSFWTQIDAFKTQLKRTEHLPEFIFYDGPPFATGLPHPGHILASTIKDIVTRYQTMTGHHVTRRFGWDCHGIPIETVIDKKLGIERRAQVLEMGIDKYNEECRSVVSTFVEEWEKVITRSGRWIDFKNDYKTMDMSFMESVWWVFAQLFDKKLIYKSFKVMPYSTGLKTQLSNSELKESKKLVSDPDAMVTFPVIGDQDNAAFVAWTTTPWNLPCNLALCVNPKFVYVKVRNKHNGRVYVVAESLLSSLPSFADTKKGKGGGGDDSYQVLETFEGASLVGKKYEPLFEYFSEFSSVAFRVVADDYVTDKSGTGIVHLAPAFGEDDYRVCLENNIVEEGEDLVVAVDEDGLFTERITHFFGRYVKDADKDIIEAVKAKGRLVKTGRVTHEYPFCPRSHTPIIYRALPSWFMRVDEQLKEQMLENTKQTHWVPNYVKDKRFHNWLENARDWCISRSRFWGTPLPIWISDDGEEVVVMDSVDKLEKLSGVKVFDLHRHHIDQITIPSSRGPEFGVLRRVEDVFDCWFESGSMPYAYIHYPFENKELFEKNFPGHFVAEGLDQTRGWFYSLMVLSTALFGKPAFQNLICNGIVLDKDGKKMSKSLNNYPPTLEIINEYGADAVRLYLINSPIVRAEPLRFKKEGALGVVKDVFLPWYNAYRFLVQNAKRLEIEGSGPFVPTDVATLRSSNVLDQWIHSATQSLVCFVRQEMDGYRLYTVVPYLLKFLDNLTNIYVRFSRKRLKGRTGEDDCHIALSTLYNVLLTSCKVMTPFTPFFTETLYQNLRKVREGSEESIHYCRFPEADKTRVERRIEQSVARMMTVIDLARNIRERHKLPLKTPLMEITVVHPDAEFLDDITGKLREYVLEELNVRSLVICNDTLKYASLKAEPDFSVLGKRLGKSMGLVAKQVKEMSQQDILRFEEAGKVTIDGHTLELTDIKIVRLFKRPDGLKDTEIDANGDGDVLVLLDLRPDDSLYEAGVAREIVNRVQKLRKKSGLEPTDFVEVYIEPLEKDESALQQVVSSQEQYIKETIGSSLLPSTLMPSHAVILSEESFQNVSKLSFKISLVRPALKFNKDAILAL